One of the first and most consequential decisions in any business acquisition is how to structure the deal: asset purchase or stock purchase. The choice affects tax treatment, liability exposure, contract assignability, third-party consent requirements, and a range of other considerations that have real economic consequences for both sides of the transaction.
Because buyers and sellers often have competing structural preferences, deal structure is regularly negotiated — and the terms agreed to in the letter of intent tend to govern, because reopening structure after the LOI is signed is very difficult. Understanding the tradeoffs before that moment is essential. For where this decision falls in the broader sell-side M&A process, see our step-by-step overview.
Asset Purchase: How It Works
In an asset purchase, the buyer acquires specific assets of the target company — physical property, intellectual property, customer contracts, equipment, inventory — and assumes only the liabilities it expressly agrees to take on. The seller retains the legal entity and all liabilities not transferred. The buyer acquires the business; the corporate container stays with the seller, who must wind it down separately after closing.
Stock Purchase: How It Works
In a stock purchase (or, for LLCs, a membership interest purchase), the buyer acquires all of the ownership interests in the target entity. The legal entity — with all of its assets, contracts, liabilities, obligations, and relationships — transfers intact. Only the ownership changes. The business continues operating in the same legal structure, and third-party relationships generally continue without the need for consent.
Why Buyers Typically Prefer Asset Deals
Liability limitation. In an asset purchase, unknown or contingent liabilities — pending lawsuits, undisclosed tax deficiencies, environmental obligations — stay with the seller’s entity. The buyer starts with a cleaner slate.
Tax basis step-up. The buyer gets a stepped-up tax basis in acquired assets equal to the purchase price. This translates into larger depreciation and amortization deductions going forward — real economic value over time that a stock purchase does not provide.
Selective acquisition. Asset deals allow buyers to leave behind unwanted liabilities, undesirable contracts, and assets they don’t need. Stock deals transfer everything.
Why Sellers Typically Prefer Stock Deals
Tax treatment. For individual sellers, a stock sale often results in capital gains treatment on the entire purchase price. In an asset sale, portions of the proceeds may be taxed as ordinary income — for assets like inventory, accounts receivable, equipment (recaptured depreciation), and covenants not to compete — producing a materially worse after-tax outcome for the seller.
Simplicity. A stock sale transfers the entire business without requiring consent to assignment of customer contracts, re-issuance of licenses, or notifications to counterparties. In an asset deal, obtaining these consents adds timeline, cost, and transaction risk. A single landlord or customer who refuses to consent can create real closing complications.
Clean exit. In a stock deal, the seller fully exits the entity at closing. In an asset deal, the seller retains the legal entity and must dissolve it separately — managing any residual liabilities and distributing remaining assets through a wind-down process.
Bridging the Gap: Section 338(h)(10)
In S corporation transactions, the parties may elect under Section 338(h)(10) of the Internal Revenue Code to treat a stock sale as an asset sale for tax purposes. This allows the buyer to obtain the benefit of an asset deal tax basis step-up while the transaction is structured as a stock deal — keeping contract assignments and third-party consents to a minimum. A 336(e) election can achieve a similar result for certain C corporation and subsidiary transactions.
These elections require careful tax analysis and mutual agreement between buyer and seller — and they are often the mechanism by which the structural preference gap gets resolved. For other creative approaches to bridging buyer-seller disagreements, see our post on innovative M&A deal structures, and on the tax treatment of earnouts.
Why Counsel’s Role Matters
The choice between asset and stock structures ripples through the entire purchase agreement: how representations and warranties are framed, how indemnification works, which disclosure schedules are required, and what closing conditions apply. Experienced M&A counsel advises on deal structure before the LOI is signed. Once the structure is agreed to in the LOI, the negotiating leverage to change it is substantially reduced.
➤ Structuring an acquisition? Contact Petersen | Landis for experienced M&A counsel.










